2024年10月17日 · NAMD, recipient of a 2002 Gordon Bell Award, a 2012 Sidney Fernbach Award, and a 2020 Gordon Bell Prize, is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems.

Download NAMD: NAMD is a parallel, object-oriented molecular dynamics code designed for high-performance simulation of large biomolecular systems. Simulation preparation and analysis is integrated into the visualization package VMD. Visit the NAMD website for complete information and documentation.

2018年2月26日 · Introductory and advanced tutorials and other resources on using the NAMD (Nanoscale Molecular Dynamics) software program. The tutorials below focus on NAMD-specific features, although many other tutorials utilize NAMD as well.

The NAMD User's Guide describes how to run and use the various features of the molecular dynamics program NAMD. This guide includes the capabilities of the program, how to use these capabilities, the necessary input files and formats, and how to run the program both on uniprocessor machines and in parallel.

2020年8月5日 · NAMD 2.8b2 User's Guide (online, 569K HTML or 973K PDF) NAMD 2.8b2 Release Notes NAMD 2.8b1 User's Guide (online, 569K HTML or 971K PDF) NAMD 2.8b1 Release Notes NAMD 2.7 User's Guide (online, 413K HTML or 861K PDF) NAMD 2.7 Release Notes NAMD 2.7b4 User's Guide (online, 414K HTML or 864K PDF)

2024年11月14日 · Participants learn how to use NAMD to set up basic molecular dynamics simulations, and to understand typical NAMD input and output files, with an emphasis on such files for protein energy minimization and equilibration in water.

The NAMD User’s Guide describes how to run and use the various features of the molecular dynamics program NAMD. This guide includes the capabilities of the program, how to use these capabilities, the necessary input les and formats, and how to run the program both on uniprocessor machines and in parallel.

2024年2月12日 · The following new features have been released in NAMD 3.0. Please see the release notes for details about installing and running NAMD and the NAMD User's Guide (online or 4.5M PDF) for a comprehensive list of NAMD's features and their use.

The NAMD User’s Guide describes how to run and use the various features of the molecular dynamics program NAMD. This guide includes the capabilities of the program, how to use these capabilities, the necessary input files and formats, and how to run the program both on uniprocessor machines and in parallel.

The NAMD User's Guide describes how to run and use the various features of the molecular dynamics program NAMD. This guide includes the capabilities of the program, how to use these capabilities, the necessary input files and formats, and how to run the program both on uniprocessor machines and in parallel.