RWTY (R We There Yet): An R package for examining convergence of Bayesian phylogenetic analyses. Molecular Biology and Evolution 34:1016-1020. doi: 10.1093/molbev/msw279. For help with RWTY problems, please check out the Google Group for RWTY. At present, RWTY is downloadable from https://github.com/danlwarren/RWTY.

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RWTY is an R package that implements established and new methods for diagnosing phylogenetic MCMC convergence in a single convenient interface. AB - Bayesian inference using Markov chain Monte Carlo (MCMC) has become one of the primary methods used to infer phylogenies from sequence data.

Visualizing MCMC Convergence in Phylogenetics. Implements various tests, visualizations, and metrics for diagnosing convergence of MCMC chains in phylogenetics. It implements and …

rwty — R We There Yet? Visualizing MCMC Convergence in Phylogenetics :exclamation: This is a read-only mirror of the CRAN R package repository.

RWTY (R We There Yet): An R package for examining convergence of Bayesian phylogenetic

RWTY is an R package that implements established and new methods for diagnosing phylogeneti c MCMC convergence in a single convenient interface. Key words: MCMC, phylogenetics, topology, MCMC, convergence, stationarity.

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RWTY: R We There Yet? This package implements various tests, visualizations, and metrics for diagnosing convergence and mixing of MCMC chains in phylogenetics. It implements and automates many of the functions of the AWTY package in the R environment. It also adds a number of new functions not available in AWTY.

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