Developed by NVIDIA, fVDB is an open-source deep learning framework for sparse, large-scale, high-performance spatial intelligence. It builds NVIDIA-accelerated AI operators on top of OpenVDB to enable reality-scale digital twins, neural radiance fields, 3D generative AI, and more.

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2005年1月1日 · VFDB provides a unified gateway to store, search, retrieve and update information about VFs from various bacterial pathogens. Bacterial pathogens continue to impose a major threat to public health worldwide in the 21st century.

To provide valuable reference resources for drug design, repurposing, and target selection, the VFDB has systematically collected public data on anti-virulence compounds through extensive literature mining, and further integrated this information with …

To achieve this combination of versatility and performance, fVDB relies on a single novel VDB index grid acceleration structure paired with several key innovations including GPU accelerated sparse grid construction, convolution using tensorcores, fast ray tracing kernels using a Hierarchical Digital Differential Analyzer algorithm (HDDA), and ja...

2024年9月15日 · Here, we establish an expanded VFG database (VFDB 2.0) consisting of 62,332 nonredundant orthologues and alleles of VFGs using species-specific average nucleotide identity...

2022年1月7日 · Thus, all known bacterial VFs from 32 genera of common bacterial pathogens collected in the VFDB are well grouped into 14 basal categories along with over 100 subcategories in a hierarchical architecture. The new coherent and well-defined VFDB dataset will be feasible and applicable for future panbacterial analysis in terms of virulence factors.

2024年9月15日 · Virulence factor genes (VFGs) play pivotal roles in bacterial infections and have been identified within the human gut microbiota. However, their involvement in chronic diseases remains poorly understood.

Note: the search engine will scan bacteria description, VF information and gene/product simultaneously. haemoglobin - query for any key words of gene product.

2018年11月5日 · The virulence factor database (VFDB, http://www.mgc.ac.cn/VFs/) is devoted to providing the scientific community with a comprehensive warehouse and online platform for deciphering bacterial pathogenesis.