ENCODE项目第三期论文解读之二：人类RNA-结合蛋白的大规模结 …
作者介绍了一组全新的数据集，记录了人体基因组的被 RNA结合蛋白 （RBPs)识别的RNA元件。 这类调控元件只在被转录为RNA时起效，作为RBPs的结合位点控制翻译后过程比如剪切、切 …
rna Map Analysis
rMAPS is a web server that systematically generates RNA-maps for the analysis of RNA-binding proteins (RBPs) binding sites which have position-dependent functions. Users can easily …
Multiomic characterization of RNA microenvironments by
2024年10月28日 · Using the noncoding RNAs 47S, 7SK and Xist as models, we develop O-MAP workflows for discovering RNA-proximal proteins, transcripts and genomic loci, yielding a …
Analysis of RNA–protein networks with RNP-MaP defines ... - Nature
2020年10月19日 · We devised ribonucleoprotein networks analyzed by mutational profiling (RNP-MaP), a live-cell chemical probing strategy that maps cooperative interactions among multiple …
A large-scale binding and functional map of human RNA-binding …
2020年7月29日 · We describe the mapping and characterization of RNA elements recognized by a large collection of human RBPs in K562 and HepG2 cells.
Large-scale map of RNA-binding protein interactomes across the …
2024年9月19日 · We generated an RNA-aware, RBP-centric PPI map across the mRNA life cycle in human cells by immunopurification-mass spectrometry (IP-MS) of ∼100 endogenous RBPs …
A high-resolution map of human RNA translation - Cell Press
This comprehensive map of human smORFs generated using primary human cell types and human tissues gives insights into an overlooked part of the genome, revealing potentially new …
RNA Duplex Map in Living Cells Reveals Higher-Order …
2016年5月19日 · A method for global mapping of RNA duplexes in living cells with near base-pair resolution, called PARIS, reveals extensive long-range structures, higher-order architectures, …
Shape Map: A Detailed Overview of RNA Analysis - BiologyInsights
2025年3月19日 · A well-constructed SHAPE map provides a detailed view of RNA structure, distinguishing between flexible loops, structured helices, and intermediate conformations. …
RNAmap2D – calculation, visualization and analysis of contact …
2012年12月21日 · RNAmap2D can calculate a contact map or a distance map of an RNA structure, compare two alternative 3D models of RNA (e.g. predicted structure versus …