medkit is a toolkit for a learning health system, developed by the HeKA research team. This python library aims at: Facilitating the manipulation of healthcare data of various modalities (e.g., structured, text, audio data) for the extraction of relevant features.

medkit is a Python library which facilitates extraction of features from various modalities of patient data, including text and audio for now – relational, image, genetic, and others will follow soon.

medkit requires a distribution of Python with a minimum version of 3.8. It is recommended to install medkit in a virtual or conda environment. Releases of medkit are published on PyPI under the name medkit-lib. This project uses Hatch to manage its dependencies. Please follow its installation instructions.

medkit is a Python library for facilitating the extraction of features from various modalities of patient data: text, audio for now - relational, image, genetic, and others soon. To this end, medkit offers to compose pipelines with modules, developed by us, yourself or others.

2024年11月15日 · medkit is an open-source library for the composition of data processing pipelines made of easy-to-reuse software bricks, which aim at facilitating phenotyping from clinical texts. In addition to the core of the library, we share many of these bricks and examples of pipelines, and invite the phenotyping community for their reuse and enrichment.

medkit is a toolkit for a learning health system, developed by the HeKA research team. This python library aims at: (2) developing supervised models from these various modalities for decision support in healthcare. To get started with medkit, follow the installation instructions described in our documentation website.

2024年8月30日 · To facilitate the development, evaluation and reproductibility of phenotyping pipelines, we developed an open-source Python library named medkit. It enables composing data processing pipelines made of easy-to-reuse software bricks, named medkit operations.

previous. API Reference. next. medkit.audio. Contents

Medkit is a Python library for facilitating the extraction of features from various modalities of patient data. Mirror of https://gitlab.inria.fr/heka/medkit - medkit ...

DrBERT-CASM2 is a French Named Entity Recognition model that was fine-tuned from DrBERT: A PreTrained model in French for biomedical and clinical domains. It has been trained to detect the following type of entities: problem, treatment and test using the medkit Trainer.