GitHub - pachterlab/ffq: A tool to find sequencing data and …
ffq is specifically designed to download metadata and to facilitate obtaining links to sequence files. To download raw data from the links obtained with ffq you can use one of the following: cURL …
FFQDC_D - Centers for Disease Control and Prevention
A food frequency questionnaire (FFQ) (sometimes referred to as the NHANES food propensity questionnaire or “FPQ”) was used in NHANES 2003-2004 and 2005-2006 to collect …
Metadata retrieval from sequence databases with ffq
2023年1月5日 · We present a command-line tool, called ffq, for querying user-generated data and metadata from sequence databases. Given an accession or a paper’s DOI, ffq efficiently …
NHANES Tutorials - NHANES Dietary Analyses Module - Centers …
FFQ_FOOD: The Food ID is a numeric code that links to the FOODLOOK file containing more detailed description about foods that were queried as follow-up to stem questions …
原始数据下载专题 | 用ffq下载原始测序数据 - 知乎
2024年12月26日 · ffq 接收一个登录号（accession），并返回该登录号的元数据（metadata），以及通过 GEO 、 SRA 、 EMBL-EBI 、 DDBJ 和 Biosample 之间的连接，获取的所有下游登录 …
ffq - PyPI
2024年3月1日 · By default, ffq returns all downstream metadata down to the level of the SRR record. However, the desired level of resolution can be specified. ffq can also skip returning …
探索基因数据的钥匙 —— 深入解析开源工具 ffq-CSDN博客
2024年8月23日 · 今天，我们向您介绍一个强大而便捷的开源工具——ffq（Fast Fetching of QA/QC metadata），它旨在简化跨多个数据库的元数据检索过程。ffq 通过其高效且直观的设 …
ffq/ffq/main.py at master · pachterlab/ffq - GitHub
f"ffq {__version__}: A command line tool to find sequencing data " "from SRA / GEO / ENCODE / ENA / EBI-EMBL / DDBJ / Biosample." parser._actions[0].help = …
FFQ 开源项目教程 - CSDN博客
2024年8月21日 · FFQ（Find FastQ）是一个用于从SRA（Sequence Read Archive）和ENA（European Nucleotide Archive）等数据库中检索FastQ文件的工具。 它通过命令行接口 …
FFQ download and data entry - MRC Epidemiology Unit
FFQ data can be processed using the FETA tool. The current FETA tool is based on version 6 (CAMB/PQ/6/1205) of the EPIC-Norfolk FFQ. The FFQ data needs to be in the correct format …